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資源導航

  • 資源導航
  • Comparative transcriptomics
1. ERGO Genome Analysis and Discovery System
ERGO provides a systems-biology informatics toolkit centered on comparative genomics to capture, query and visualize sequenced genomes. Building upon the most comprehensive genomic database available anywhere integrated with the largest collection of microbial metabolic and non-metaboli...
標簽：Metabolic reconstruction,Phylogenetics,?Comparative genomics,?SNP Annotation,?SNP discovery,?Alignment,?Exome analysis,?Metagenomics,Pathway analysis,?Comparative transcriptomics,?Functional Genomics,?Gene Expression Analysis,?Genome Wide Association Stud
2. GenomeView
GenomeView is a next-generation stand-alone genome browser and editor initiated in the BSB group at VIB and currently developed at Broad Institute. It provides interactive visualization of sequences, annotation, multiple alignments, syntenic mappings, short read alignments and more. Man...
標簽：Genomics,?Comparative genomics,?Comparative transcriptomics,Transcriptomics,?Gene annotation retrieval,?Quality Control,?Sequencing,?Sequence analysis
3. Kissnp
kisSnp compares two sets of NGS raw reads, detecting Single Nucleotide Polymorphism occurring between the two sets. The two sets typically come from the sequencing of two individuals from the same species or from closely related species.
標簽：Comparative genomics,Comparative transcriptomics,Gene annotation retrieval,?SNP discovery,?InDel discovery
4. Syapse
Syapse is a platform and application suite for bringing together omics and clinical data.
標簽：Allele-specific transcription,DNA methylation,?DNA-Seq,InDel discovery,?SNP discovery,?Structural variation,?RNA-Seq,?Small RNA transcriptome,?ChIP-Seq,Comparative genomics,Comparative transcriptomics,Epigenomics,?Genomics,Personal genomics,?Population ge